test_notebooks_pullrequest.yml

name: Test changed files on pull request

on:
  pull_request:
    branches: [ develop ]

permissions:
  id-token: write # Required for OIDC authentication to AWS
  contents: read

jobs:
  test-notebooks:
    runs-on: ubuntu-latest

    steps:

      - uses: actions/checkout@v4
        with:
          path: dea-notebooks

      - name: Get changed notebook files
        id: changed-notebooks
        uses: tj-actions/changed-files@v45
        with:
          files: '**/*.ipynb'
          separator: ' '

      - name: Print changed notebook files
        if: steps.changed-notebooks.outputs.any_changed == 'true'
        run: |
          echo "Changed notebook files:"
          echo "${{ steps.changed-notebooks.outputs.all_changed_files }}"

      - name: Set up database access and tests
        if: steps.changed-notebooks.outputs.any_changed == 'true'
        uses: ./dea-notebooks/.github/actions/test_setup
        with:
          image: stable

      - name: Test changed Jupyter notebooks only
        if: steps.changed-notebooks.outputs.any_changed == 'true'
        run: |
          sudo chown -R 1000:100 ./dea-notebooks
          cd ./dea-notebooks
          docker run --rm \
            --net=host \
            --env DATACUBE_DB_URL \
            --env AWS_SESSION_TOKEN \
            --env AWS_REGION \
            --env AWS_ACCESS_KEY_ID \
            --env AWS_SECRET_ACCESS_KEY \
            --env AWS_SESSION_TOKEN \
            --volume ${GITHUB_WORKSPACE}/dea-notebooks:/home/jovyan/dea-notebooks \
            --volume ${GITHUB_WORKSPACE}/tide_models:/var/share/tide_models \
            --env GDAL_HTTP_MAX_RETRY=10 \
            --entrypoint /bin/bash \
            538673716275.dkr.ecr.ap-southeast-2.amazonaws.com/geoscienceaustralia/sandbox:stable \
            /home/jovyan/dea-notebooks/Tests/test_notebooks.sh "${{ steps.changed-notebooks.outputs.all_changed_files }}"

      - name: Test DEA Tools
        if: steps.changed-notebooks.outputs.any_changed == 'true'
        run: |
          sudo chown -R 1000:100 ./dea-notebooks
          cd ./dea-notebooks
          docker run --rm \
            --net=host \
            --env DATACUBE_DB_URL \
            --env AWS_SESSION_TOKEN \
            --env AWS_REGION \
            --env AWS_ACCESS_KEY_ID \
            --env AWS_SECRET_ACCESS_KEY \
            --env AWS_SESSION_TOKEN \
            --volume ${GITHUB_WORKSPACE}/dea-notebooks:/home/jovyan/dea-notebooks \
            --volume ${GITHUB_WORKSPACE}/tide_models:/var/share/tide_models \
            --env GDAL_HTTP_MAX_RETRY=10 \
            --entrypoint /bin/bash \
            538673716275.dkr.ecr.ap-southeast-2.amazonaws.com/geoscienceaustralia/sandbox:stable \
            /home/jovyan/dea-notebooks/Tests/test_notebooks.sh dea_tools