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manual_SPECFEM3D_GLOBE.tex
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\documentclass[oneside,english]{book}
\usepackage[T1]{fontenc}
%% DK DK we do not accept accented letters, use the old LaTeX syntax
%% DK DK for them instead: \'e \`e \"e \^e and so on.
%% DK DK \usepackage[latin1]{inputenc}
\usepackage{geometry}
\geometry{letterpaper,tmargin=1in,bmargin=1in,lmargin=1in,rmargin=1in}
\setcounter{secnumdepth}{3}
\setcounter{tocdepth}{3}
\usepackage{longtable}
\usepackage{varioref}
\usepackage{float}
\usepackage{textcomp}
\usepackage{amsmath}
% tables
\usepackage{booktabs}
% figures
\usepackage[pdftex]{graphicx}
% we are running pdflatex, so convert .eps files to .pdf
%\usepackage{epstopdf}
\usepackage{amssymb}
\IfFileExists{url.sty}{\usepackage{url}}
{\newcommand{\url}{\texttt}}
\usepackage[authoryear]{natbib}
\makeatletter
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% LyX specific LaTeX commands.
%% Because html converters don't know tabularnewline
\providecommand{\tabularnewline}{\\}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% Textclass specific LaTeX commands.
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%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% User specified LaTeX commands.
% fonts
\usepackage{times}
\usepackage{natbib}
% date of last edit
\date{\today}
% colors for the text
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\newcommand{\red}[1]{\textcolor{Red}{#1}}
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% create thumbnails
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% hyperlinks to sections and references
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% more options
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bookmarks=true,
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colorlinks=true, % color links
citecolor=dark-gray, % citation links
filecolor=dark-gray, % file links
linkcolor=dark-gray, % internal link (rgb values)
urlcolor=dark-blue % external weblinks
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\newcommand{\urlwithparentheses}[1]{(\url{#1})}
% biblio GJI
\bibliographystyle{abbrvnat}
\newcommand{\toall}[1]{\textbf{*** All: #1 ***}}
\newcommand{\tojeroen}[1]{\textbf{*** Jeroen: #1 ***}}
\newcommand{\tobrian}[1]{\textbf{*** Brian: #1 ***}}
\newcommand{\tovala}[1]{\textbf{*** Vala: #1 ***}}
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\newcommand{\nchunks}{\mbox{\texttt{NCHUNKS}}}
% Latex generated graphics
\usepackage{tikz}
\usetikzlibrary{trees}
\usepackage{babel}
\makeatother
\begin{document}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%% Title
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\thispagestyle{empty}
\begin{center}
\vspace*{-1.8truecm}
\noindent\makebox[\textwidth]{\noindent\includegraphics[width=0.83\paperwidth]{figures/specfem_3d_globe-cover.pdf}}
\end{center}
%
\title{\thispagestyle{empty}\textbf{SPECFEM3D\_GLOBE}\\
\textbf{User Manual}}
%
\author{$\copyright$ Princeton University (USA) and CNRS / University of Marseille (France),\\
ETH Z\"urich (Switzerland),\\
Version 7.0}
\date{\noindent \today}
\maketitle
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\include{authors}
\newpage{}
\include{sponsors}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%% Table of contents
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\newpage{}
\tableofcontents{}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\include{01_introduction}
\include{02_getting_started}
\include{03_running_the_mesher}
\include{04_running_the_solver}
\include{05_regional_simulations}
\include{06_adjoint_simulations}
\include{07_doing_tomography}
\include{08_noise_simulations}
\include{09_gravity_calculations}
\include{10_graphics}
\include{11_running_scheduler}
\include{12_changing_the_model}
\include{13_post_processing}
\include{14_informations_for_developers}
\include{features}
\include{bug_reports}
\include{notes_and_acknowledgement}
\include{copyright_and_version}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%% Bibliography
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
{\small \bibliography{bibliography}}{\small \par}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%% Appendix
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\appendix
\include{A_reference_frame}
\include{B_non-dimensionalization_conventions}
\include{C_benchmarks}
\include{D_SAC_headers}
\include{E_channel_codes}
\include{F_troubleshooting}
\include{G_license}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\end{document}