diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 46a9cc3..0f2d6d4 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -13,7 +13,7 @@ jobs: strategy: fail-fast: false matrix: - python-version: ["3.7", "3.9", "3.10", "3.11"] + python-version: ["3.8", "3.9", "3.10", "3.11"] runs-on: [ubuntu-latest, windows-latest, macos-latest] steps: @@ -33,7 +33,6 @@ jobs: pip install . - name: Test some examples - if: ${{ matrix.python-version != '3.7' || matrix.runs-on != 'macos-latest' }} # mac + py3.7 requires build of _bz2 module... run: | cd scripts python gene_expression.py @@ -42,6 +41,12 @@ jobs: python signalpropagation_kernels.py python plot_signal_propagation.py + python make_neuropeptidergic_connectome.py + ls -alth + python pep_connectome_extract_combos.py tests/test_pep_pairs.txt + more tests/* + + - name: Final version info run: | diff --git a/.gitignore b/.gitignore index ab06de1..45eaec8 100644 --- a/.gitignore +++ b/.gitignore @@ -132,3 +132,4 @@ dmypy.json *.~lock* wormneuroatlas/drafts.py scripts/snippets_for_paper.py +/scripts/tests/test_pep_pairs_pepgpcr_combos.txt diff --git a/scripts/tests/test_pep_pairs.txt b/scripts/tests/test_pep_pairs.txt new file mode 100644 index 0000000..8d6a6be --- /dev/null +++ b/scripts/tests/test_pep_pairs.txt @@ -0,0 +1 @@ +AVAL -> RMMDR