From b3e578d97685f4ce9223ea453d197d8f34c855d7 Mon Sep 17 00:00:00 2001 From: duncan ralph Date: Sat, 9 Mar 2024 15:25:06 -0800 Subject: [PATCH] update bcr-phylo + dockerfile --- Dockerfile | 2 +- packages/bcr-phylo-benchmark | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/Dockerfile b/Dockerfile index c3d14e914..efb8dd183 100644 --- a/Dockerfile +++ b/Dockerfile @@ -27,7 +27,7 @@ ARG MAMBA_DOCKERFILE_ACTIVATE=1 RUN micromamba install -y -c conda-forge -c bioconda -cbiocore -c etetoolkit \ python biopython pandas psutil pysam scons seaborn zlib pyyaml scikit-learn \ mafft circlify ete3 -RUN pip install colored-traceback dendropy levenshtein +RUN pip install colored-traceback dendropy joypy levenshtein ENV XDG_RUNTIME_DIR=/tmp/xdgrd RUN mkdir $XDG_RUNTIME_DIR RUN chmod 0700 $XDG_RUNTIME_DIR diff --git a/packages/bcr-phylo-benchmark b/packages/bcr-phylo-benchmark index c32f57266..fc40f8183 160000 --- a/packages/bcr-phylo-benchmark +++ b/packages/bcr-phylo-benchmark @@ -1 +1 @@ -Subproject commit c32f572663bedb96cc7051247ffb7cec1e079171 +Subproject commit fc40f818303d574fd8883e69202d97f7ad1b6a3d