diff --git a/python/waterer.py b/python/waterer.py index 434ff8242..4a76f7425 100644 --- a/python/waterer.py +++ b/python/waterer.py @@ -1542,6 +1542,7 @@ def combine_indels(self, qinfo, best, debug=False): if 'v' in qinfo['new_indels']: # if sw kicks up an additional v indel that vsearch didn't find, we rerun sw with if debug: print ' sw called a v indel, but there\'s already a vsearch v indel, so give up (rerun sw forbidding indels)' + del self.info['indels'][qinfo['name']] return None vs_indelfo = self.info['indels'][qinfo['name']]