Merge branch 'development' of https://github.com/revbayes/revbayes in…

…to development

src/revlanguage/distributions/phylogenetics/tree/Dist_constPopMultispCoal.cpp

@@ -269,7 +269,7 @@ const TypeSpec& Dist_constPopMultispCoal::getTypeSpec( void ) const
       // create an example as a single string variable.
       std::string example = "";
       example += "# We are going to save the trees we simulate in the folder simulatedTrees:\n";
-      example += "dataFolder = \"simulatedTrees\" \n";
+      example += "dataFolder = \"simulatedTrees/\" \n";
       example += "# Let’s simulate a species tree with 10 taxa, 2 gene trees, 3 alleles per species:\n";
       example += "n_species <- 10\n";
       example += "n_genes <- 2\n";

src/revlanguage/distributions/phylogenetics/tree/Dist_multispeciesCoalescentInverseGammaPrior.cpp

@@ -271,7 +271,7 @@ std::string Dist_multispeciesCoalescentInverseGammaPrior::getHelpExample(void) c
     // create an example as a single string variable.
     std::string example = "";
     example += "# We are going to save the trees we simulate in the folder simulatedTrees:\n";
-    example += "dataFolder = \"simulatedTrees\" \n";
+    example += "dataFolder = \"simulatedTrees/\" \n";
     example += "# Let’s simulate a species tree with 10 taxa, 2 gene trees, 3 alleles per species:\n";
     example += "n_species <- 10\n";
     example += "n_genes <- 2\n";

src/revlanguage/distributions/phylogenetics/tree/Dist_multispeciesCoalescentUniformPrior.cpp

@@ -250,7 +250,7 @@ const TypeSpec& Dist_multispeciesCoalescentUniformPrior::getTypeSpec( void ) con
       // create an example as a single string variable.
       std::string example = "";
       example += "# We are going to save the trees we simulate in the folder simulatedTrees:\n";
-      example += "dataFolder = \"simulatedTrees\" \n";
+      example += "dataFolder = \"simulatedTrees/\" \n";
       example += "# Let’s simulate a species tree with 10 taxa, 2 gene trees, 3 alleles per species:\n";
       example += "n_species <- 10\n";
       example += "n_genes <- 2\n";

src/revlanguage/moves/tree/Move_SpeciesNarrowExchange.cpp

@@ -299,7 +299,7 @@ void Move_SpeciesNarrowExchange::setConstParameter(const std::string& name, cons
       // create an example as a single string variable.
       std::string example = "";
       example += "# We are going to save the trees we simulate in the folder simulatedTrees:\n";
-      example += "dataFolder = \"simulatedTrees\" \n";
+      example += "dataFolder = \"simulatedTrees/\" \n";
       example += "# Let’s simulate a species tree with 10 taxa, 2 gene trees, 3 alleles per species:\n";
       example += "n_species <- 10\n";
       example += "n_genes <- 2\n";