phyml-mpi

[yuyuqi-design]

when I use phyml-mpi, it seemed that phyml-mpi did not recognize my cpu number specified by mpirun -np 2, running as ' Running the analysis on 1 CPU..' and gave me the error
The number of CPUs used in the MPI bootstrap analysis should be
. strictly greater than 1 (it is equal to 1 here).
My command is :
mpd &
mpirun -np 2 phyml-mpi -i trim2_outgroup_dropDupli.phy -d aa -q -b 100 -m LG -a 0.749 -f m --pinv 0.05

Thanks a lot!

Yuqi

[stephaneguindon]

Please use the following command instead:
mpirun -np 2 ./phyml-mpi -i trim2_outgroup_dropDupli.phy -d aa -q -b 100 -m LG -a 0.749 -f m --pinv 0.05

[liamxg]

@yuyuqi-design do you success to install mpi version?