automatic official FASTA file fetching, several new utility functions related to structure including flexible 3d alignment that supports different length chains to be aligned! #380
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| name: Lint | |
| on: [pull_request] | |
| jobs: | |
| black: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: psf/black@stable | |
| with: | |
| options: "--check --verbose --diff --color" | |
| src: "." | |
| version: "22.3.0" | |
| flake8: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: "3.7" | |
| - uses: py-actions/flake8@v2 | |
| with: | |
| path: "." | |
| mypy: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: "3.7" | |
| - run: pip install --upgrade pip | |
| - run: pip install mypy==0.950 | |
| - run: python -m mypy . --show-error-codes | |
| nb-clean: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: "3.7" | |
| - run: pip install --upgrade pip | |
| - run: pip install nb-clean | |
| - run: nb-clean check . -o |