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String compression #8

Merged
merged 6 commits into from
Aug 13, 2019
Merged

String compression #8

merged 6 commits into from
Aug 13, 2019

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dievsky
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@dievsky dievsky commented Aug 13, 2019

Introducing a class for the efficient storage of a sequence of relatively short, relatively repetitive strings. The strings are opaquely concatenated in large chunks and GZIP-ped. Only the compressed superstring and the offset-length pair for each individual string are stored.

@dievsky dievsky self-assigned this Aug 13, 2019
@dievsky dievsky merged commit e2d6de1 into master Aug 13, 2019
@dievsky dievsky deleted the issue-epigenome-1430 branch February 8, 2020 12:21
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