Skip to content

PGPHarvard/pgp-surveys

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

23 Commits
 
 
 
 
 
 
 
 
 
 

Repository files navigation

PDF Export of PGP Survey Questions

Quickstart

Got to the Surveys folder above.

To add a new survey to repository

  • Git clone this repository.
  • Use Google Chrome or Chromium browser. Login to pgp survey google account. Go to https://drive.google.com/drive/#, open the form in question (NOT the google spreadsheet, NOT the "live form"), and go to File>Print. "Save as PDF". The name should be based on the # and the name in https://my.pgp-hms.org/google_surveys. e.g. "[19] PGP Basic Phenotypes Survey 2015 [Form].pdf".
  • Add the file to the /surveys folder
  • In this readme file, update the total number of surveys, then make a new table with the latest number of responses. For help formatting the table, use http://www.tablesgenerator.com/markdown_tables
  • Download the CSV response file and put in the /responses folder
  • Add commit push changes (or fork and submit a pull request).

About

Currently, the Harvard Personal Genome Project website provides a CSV export of the public results for each survey. While these CSVs have headers, the list of possible answers is not available.

As a temporary quickfix, I printed out to PDF the 13 surveys with publicly available results, as a temporary dump of both the survey questions and answer choices. Google Forms has a nice (css? javascript?) ctrl-p function. When you hit "ctrl-p" on the editable version of the form, it prints out a form you could fill out by hand (with all the options expanded).

For the "Participant Survey", which involved extensive dropdown menus (year and country), I printed out two version: one with all the choies (printed from the "editable" page) and one as the participant sees it, with the dropdown minimized (printed from the "submit" page).

I have included a CSV export of the responses as well (the filenames include a timestamp). For the most up-to-date dump of responses, see: https://my.pgp-hms.org/google_surveys

To make it easy to cross-reference the survey questions and the survey responses, I prefixed each file with the "PGP HMS Google Survey" number. These indices can also be found in the URL in the table below. For instance, Blood is marked with [08].

Todo

  • Add these survey questions directly to the Tapestry website (https://my.pgp-hms.org/google_surveys), alongside the responses which are already available on there.
  • Write a google script to allow import and export in something easy to parse (for instance, markdown).
  • Write a script to automate updating of this repository

Info

Reference

Total Number of Surveys: 14

Dump, 2015-07-21

URL # Name Public Link Responses (2015-07-21 22:15:12 UTC) Participants (2015-07-21 22:15:12 UTC)
1 PGP Participant Survey https://my.pgp-hms.org/google_surveys/1 3302 2689
6 PGP Trait & Disease Survey 2012: Cancers https://my.pgp-hms.org/google_surveys/6 1819 1667
7 PGP Trait & Disease Survey 2012: Endocrine, metabolic, nutritional, and immune https://my.pgp-hms.org/google_surveys/7 1763 1616
9 PGP Trait & Disease Survey 2012: Blood https://my.pgp-hms.org/google_surveys/8 1696 1581
9 PGP Trait & Disease Survey 2012: Nervous system https://my.pgp-hms.org/google_surveys/9 1663 1553
10 PGP Trait & Disease Survey 2012: Vision and hearing https://my.pgp-hms.org/google_surveys/10 1717 1625
11 PGP Trait & Disease Survey 2012: Circulatory system https://my.pgp-hms.org/google_surveys/11 1614 1517
12 PGP Trait & Disease Survey 2012: Respiratory system https://my.pgp-hms.org/google_surveys/12 1573 1502
13 PGP Trait & Disease Survey 2012: Digestive system https://my.pgp-hms.org/google_surveys/13 1596 1514
14 PGP Trait & Disease Survey 2012: Genitourinary systems https://my.pgp-hms.org/google_surveys/14 1581 1497
15 PGP Trait & Disease Survey 2012: Skin and subcutaneous tissue https://my.pgp-hms.org/google_surveys/15 1630 1540
16 PGP Trait & Disease Survey 2012: Musculoskeletal system and connective tissue https://my.pgp-hms.org/google_surveys/16 1628 1513
17 PGP Trait & Disease Survey 2012: Congenital traits and anomalies https://my.pgp-hms.org/google_surveys/17 1693 1568

Dump, 2015-09-03 20:46:23 UTC

URL # Name Public Link Responses Participants
19 PGP Basic Phenotypes Survey 2015 https://my.pgp-hms.org/google_surveys/19 259 255

Contact

Nancy Ouyang ([email protected])

Export Date

July 21, 2015.

License

CC0 1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/

Thanks

Thanks to www.tablesgenerator.com/markdown_tables, which I used to create tables in markdown (copy-pasting out of google docs).

Releases

No releases published

Packages

No packages published

Contributors 4

  •  
  •  
  •  
  •