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  • Genedata AG
  • Basel, Switzerland / Freiburg, Germany

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  1. deeptools/deepTools deeptools/deepTools Public

    Tools to process and analyze deep sequencing data.

    Python 681 212

  2. ChromosomeMappings ChromosomeMappings Public

    This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.

    233 59

  3. deeptools/pyBigWig deeptools/pyBigWig Public

    A python extension for quick access to bigWig and bigBed files

    C 216 48

  4. libBigWig libBigWig Public

    A C library for handling bigWig files

    C 73 25

  5. MethylDackel MethylDackel Public

    A (mostly) universal methylation extractor for BS-seq experiments.

    C 162 44

  6. bison bison Public

    Bisulfite alignment on nodes of a cluster

    C 9 2