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@monarch-initiative

Monarch Initiative

Cross-species disease discovery and diagnosis

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  1. mondo mondo Public template

    Mondo Disease Ontology

    Jupyter Notebook 239 54

  2. koza koza Public

    Data transformation framework for LinkML data models

    Python 48 4

  3. MAxO MAxO Public

    Medical action ontology

    HTML 55 4

  4. helpdesk helpdesk Public

    The Monarch Initiative Helpdesk

    7

  5. monarch-ingest monarch-ingest Public

    Data ingest application for Monarch Initiative knowledge graph using Koza

    Python 15 3

  6. monarch-app monarch-app Public

    Monarch Initiative website and API

    Python 20 6

Repositories

Showing 10 of 247 repositories
  • medgen Public

    MedGen ingest.

    monarch-initiative/medgen’s past year of commit activity
    Python 2 0 9 0 Updated Feb 16, 2025
  • omim Public

    Data ingest pipeline for OMIM.

    monarch-initiative/omim’s past year of commit activity
    Jupyter Notebook 7 3 66 5 Updated Feb 16, 2025
  • mondo Public template

    Mondo Disease Ontology

    monarch-initiative/mondo’s past year of commit activity
    Jupyter Notebook 239 CC-BY-4.0 54 407 (2 issues need help) 53 Updated Feb 15, 2025
  • monochrom Public

    Standardized identifiers and OWL classes for chromosomes and chromosomal parts across species

    monarch-initiative/monochrom’s past year of commit activity
    Python 13 2 18 0 Updated Feb 15, 2025
  • monarch-documentation Public

    Technical documentation for all Monarch applications, packages, services and related projects.

    monarch-initiative/monarch-documentation’s past year of commit activity
    Python 7 GPL-3.0 0 21 1 Updated Feb 15, 2025
  • llm-matrix Public

    Run multiple AI prompts in batch

    monarch-initiative/llm-matrix’s past year of commit activity
    Python 2 MIT 0 0 0 Updated Feb 15, 2025
  • monarch-initiative/monarchkg-model-organism-gene-transform’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Feb 14, 2025
  • monarch-ingest Public

    Data ingest application for Monarch Initiative knowledge graph using Koza

    monarch-initiative/monarch-ingest’s past year of commit activity
    Python 15 3 35 3 Updated Feb 14, 2025
  • monarch-app Public

    Monarch Initiative website and API

    monarch-initiative/monarch-app’s past year of commit activity
    Python 20 BSD-3-Clause 6 191 (3 issues need help) 12 Updated Feb 14, 2025
  • oak-agent Public
    monarch-initiative/oak-agent’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Feb 14, 2025

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