change email, bump version (#447)

openpharma · Jun 26, 2024 · 6f6959f · 6f6959f
1 parent 52d4320
commit 6f6959f
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Showing 7 changed files with 11 additions and 9 deletions.
diff --git a/.gitignore b/.gitignore
@@ -46,3 +46,4 @@ renv
 renv.lock
 *.pyc
 nohup.out
+inst/doc
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,9 +1,9 @@
 Type: Package
 Package: mmrm
 Title: Mixed Models for Repeated Measures
-Version: 0.3.11.9002
+Version: 0.3.12
 Authors@R: c(
-    person("Daniel", "Sabanes Bove", , "daniel.sabanes_bove@roche.com", role = c("aut", "cre")),
+    person("Daniel", "Sabanes Bove", , "daniel.sabanes_bove@rconis.com", role = c("aut", "cre")),
     person("Liming", "Li", , "[email protected]", role = "aut"),
     person("Julia", "Dedic", , "[email protected]", role = "aut"),
     person("Doug", "Kelkhoff", , "[email protected]", role = "aut"),

diff --git a/NEWS.md b/NEWS.md
@@ -1,4 +1,4 @@
-# mmrm 0.3.11.9002
+# mmrm 0.3.12
 
 ### New Features
 

diff --git a/R/tmb.R b/R/tmb.R
@@ -151,11 +151,11 @@ h_mmrm_tmb_data <- function(formula_parts,
   if (drop_levels) {
     full_frame <- droplevels(full_frame, except = formula_parts$visit_var)
   }
-  if (allow_na_response) {
-    # response is always the first column
-    keep_ind <- complete.cases(full_frame[, -1L, drop = FALSE])
+  keep_ind <- if (allow_na_response) {
+    # Note that response is always the first column.
+    stats::complete.cases(full_frame[, -1L, drop = FALSE])
   } else {
-    keep_ind <- complete.cases(full_frame)
+    stats::complete.cases(full_frame)
   }
   full_frame <- full_frame[keep_ind, ]
   if (drop_visit_levels && !formula_parts$is_spatial && is.factor(full_frame[[formula_parts$visit_var]])) {

diff --git a/man/mmrm-package.Rd b/man/mmrm-package.Rd
diff --git a/mmrm.Rproj b/mmrm.Rproj
@@ -18,6 +18,5 @@ StripTrailingWhitespace: Yes
 BuildType: Package
 PackageUseDevtools: Yes
 PackageInstallArgs: --no-multiarch --with-keep.source
-PackageBuildArgs: --no-build-vignettes
 PackageCheckArgs: --no-vignettes
 PackageRoxygenize: rd,collate,namespace
diff --git a/vignettes/.gitignore b/vignettes/.gitignore
@@ -0,0 +1,2 @@
+*.html
+*.R