piquelab / ParturitionMyometrium Public

Single-Cell Atlas of Human Parturition: The Myometrium

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Name		Name	Last commit message	Last commit date
Latest commit History 13 Commits
10_alluvial_plot.R		10_alluvial_plot.R
10_cellchat_analysis.R		10_cellchat_analysis.R
10_ploting_example_genes.R		10_ploting_example_genes.R
11_pathway_analysis.R		11_pathway_analysis.R
12_down_stream_analysis.R		12_down_stream_analysis.R
13_sample_investigation.R		13_sample_investigation.R
14_deconvolution_analysis.R		14_deconvolution_analysis.R
1_demux.R		1_demux.R
1_souporcell.R		1_souporcell.R
1b_demux_anal.R		1b_demux_anal.R
2_merge_kb_counts.R		2_merge_kb_counts.R
3_mergeDemuxlet.R		3_mergeDemuxlet.R
4_runHarmony.R		4_runHarmony.R
4_runHarmonyCellClassify_PBMC.R		4_runHarmonyCellClassify_PBMC.R
4_runHarmonyCellClassify_RVT.R		4_runHarmonyCellClassify_RVT.R
4_runHarmonyCellClassify_endometrium.R		4_runHarmonyCellClassify_endometrium.R
4_runHarmonyCellClassify_parturition_elife.R		4_runHarmonyCellClassify_parturition_elife.R
5_PlotCellTypeDGE.R		5_PlotCellTypeDGE.R
5_cellTypeDGE.R		5_cellTypeDGE.R
5_cellTypeDGE_subtypes.R		5_cellTypeDGE_subtypes.R
5_plotHarmonyCellPostPlo.R		5_plotHarmonyCellPostPlo.R
5b_cellTypeAnalysisByCondition.R		5b_cellTypeAnalysisByCondition.R
6_heatmap_celltypes.R		6_heatmap_celltypes.R
7_Clusters_markers.R		7_Clusters_markers.R
7_DEseq_CompareConditionsWithinClusters.R		7_DEseq_CompareConditionsWithinClusters.R
8_DEseq_PlotQQplots.R		8_DEseq_PlotQQplots.R
9_enrichment_analysis_gsea.R		9_enrichment_analysis_gsea.R
LICENSE		LICENSE
README.md		README.md